Publications

Cheng Y, Tran Minh N, Tran Minh Q, Khandelwal S, Clapham HE.
Estimates of Japanese Encephalitis mortality and morbidity: A systematic review and modeling analysis
PLoS Negl Trop Dis. 2022 May 25;16(5):e0010361. doi: 10.1371/journal.pntd.0010361. eCollection 2022 May.
Soh S, Ho SH, Ong J, Seah A, Dickens BS, Tan KW, Koo JR, Cook AR, Sim S, Tan CH, Ng LC, Lim JT.
Strategies to Mitigate Establishment under the Wolbachia Incompatible Insect Technique
Viruses. 2022 May 24;14(6):1132. doi: 10.3390/v14061132.
Burger EA, Laprise JF, Sy S, Regan MC, Prem K, Jit M, Brisson M, Kim JJ.
Now or later: Health impacts of delaying single-dose HPV vaccine implementation in a high-burden setting
Int J Cancer. 2022 Nov 15;151(10):1804-1809. doi: 10.1002/ijc.34054. Epub 2022 May 24.
Goh FT, Chew YZ, Tam CC, Yung CF, Clapham H.
A country-specific model of COVID-19 vaccination coverage needed for herd immunity in adult only or population wide vaccination programme
Epidemics. 2022 Jun;39:100581. doi: 10.1016/j.epidem.2022.100581. Epub 2022 May 20.
Tan RKJ, Koh WL, Le D, Banerjee S, Chio MT, Chan RKW, Wong CM, Tai BC, Wong ML, Cook AR, Chen MI, Wong CS.
Effect of a Popular Web Drama Video Series on HIV and Other Sexually Transmitted Infection Testing Among Gay, Bisexual, and Other Men Who Have Sex With Men in Singapore: Community-Based, Pragmatic, Randomized Controlled Trial
J Med Internet Res. 2022 May 6;24(5):e31401. doi: 10.2196/31401.
Mao Y, Tan KXQ, Seng A, Wong P, Toh SA, Cook AR.
Stratification of Patients with Diabetes Using Continuous Glucose Monitoring Profiles and Machine Learning
Health Data Sci. 2022 Apr 27;2022:9892340. doi: 10.34133/2022/9892340. eCollection 2022.
Koo JR, Cook AR, Lim JT, Tan KW, Dickens BL.
Modelling the Impact of Mass Testing to Transition from Pandemic Mitigation to Endemic COVID-19
Viruses. 2022 May 5;14(5):967. doi: 10.3390/v14050967.
Kingkaew P, Budtarad N, Khuntha S, Barlow E, Morton A, Isaranuwatchai W, Teerawattananon Y, Painter C.
A model-based study to estimate the health and economic impact of health technology assessment in Thailand
Int J Technol Assess Health Care. 2022 May 4;38(1):e45. doi: 10.1017/S0266462322000277.
Park M, Tan KB, Vasoo S, Dickens BL, Lye D, Cook AR.
Estimated Health Outcomes and Costs Associated With Use of Monoclonal Antibodies for Prevention or Mitigation of SARS-CoV-2 Infections
JAMA Netw Open. 2022 Apr 1;5(4):e225750. doi: 10.1001/jamanetworkopen.2022.5750.
Sun H, Koo J, Dickens BL, Clapham HE, Cook AR.
Short-term and long-term epidemiological impacts of sustained vector control in various dengue endemic settings: A modelling study
PLoS Comput Biol. 2022 Apr 1;18(4):e1009979. doi: 10.1371/journal.pcbi.1009979. eCollection 2022 Apr.
Zeng Z, Cook AR, Chen JI, van der Eijk Y.
Evaluating the public health impact of partial and full tobacco flavour bans: A simulation study
Lancet Reg Health West Pac. 2022 Mar 1;21:100414. doi: 10.1016/j.lanwpc.2022.100414. eCollection 2022 Apr.
Sum KK, Tint MT, Aguilera R, Dickens BSL, Choo S, Ang LT, Phua D, Law EC, Ng S, Tan KM, Benmarhnia T, Karnani N, Eriksson JG, Chong YS, Yap F, Tan KH, Lee YS, Chan SY, Chong MFF, Huang J.
The socioeconomic landscape of the exposome during pregnancy
Environ Int. 2022 May;163:107205. doi: 10.1016/j.envint.2022.107205. Epub 2022 Mar 26.
Tan SHX, Pung R, Wang LF, Lye DC, Ong B, Cook AR, Tan KB.
Association of Homologous and Heterologous Vaccine Boosters With COVID-19 Incidence and Severity in Singapore
JAMA. 2022 Mar 22;327(12):1181-1182. doi: 10.1001/jama.2022.1922.
Mo Y, Pham TM, Lim C, Horby P, Stewardson AJ, Harbarth S, Scott GM, Cooper BS.
The effect of hand hygiene frequency on reducing acute respiratory infections in the community: a meta-analysis
Epidemiol Infect. 2022 Mar 21;150:e79. doi: 10.1017/S0950268822000516.
Petrunoff NA, Edney S, Yi NX, Dickens BL, Joel KR, Xin WN, Sia A, Leong D, van Dam RM, Cook AR, Sallis JF, Chandrabose M, Owen N, Müller-Riemenschneider F.
Associations of park features with park use and park-based physical activity in an urban environment in Asia: A cross-sectional study
Health Place. 2022 May;75:102790. doi: 10.1016/j.healthplace.2022.102790. Epub 2022 Mar 19.
García-Carreras B, Yang B, Grabowski MK, Sheppard LW, Huang AT, Salje H, Clapham HE, Iamsirithaworn S, Doung-Ngern P, Lessler J, Cummings DAT.
Periodic synchronisation of dengue epidemics in Thailand over the last 5 decades driven by temperature and immunity
PLoS Biol. 2022 Mar 18;20(3):e3001160. doi: 10.1371/journal.pbio.3001160. eCollection 2022 Mar.
Teerawattananon Y, Kc S, Chi YL, Dabak S, Kazibwe J, Clapham H, Lopez Hernandez C, Leung GM, Sharifi H, Habtemariam M, Blecher M, Nishtar S, Sarkar S, Wilson D, Chalkidou K, Gorgens M, Hutubessy R, Wibulpolprasert S.
Recalibrating the notion of modelling for policymaking during pandemics
Epidemics. 2022 Mar;38:100552. doi: 10.1016/j.epidem.2022.100552. Epub 2022 Mar 2.
Quek AML, Ooi DSQ, Teng O, Chan CY, Ng GJL, Ng MY, Yee S, Cheong EW, Weng R, Cook AR, Hartman M, Angeli V, Tambyah PA, Seet RCS.
Zinc and vitamin C intake increases spike and neutralising antibody production following SARS-CoV-2 infection
Clin Transl Med. 2022 Feb;12(2):e731. doi: 10.1002/ctm2.731.
Marzouk M, Alhiraki OA, Aguas R, Gao B, Clapham H, Obaid W, Altaleb H, Almhawish N, Rihawi H, Abbara A, Douedari Y, Hariri M, Howard N; CoMo Consortium.
SARS-CoV-2 transmission in opposition-controlled Northwest Syria: modeling pandemic responses during political conflict
Int J Infect Dis. 2022 Apr;117:103-115. doi: 10.1016/j.ijid.2022.01.062. Epub 2022 Feb 2.
Koo JR, Dickens BL, Jin S, Lim JT, Sun Y, Tan KW, Cook AR.
Testing strategies to contain COVID-19 in migrant worker dormitories
J Migr Health. 2022;5:100079. doi: 10.1016/j.jmh.2022.100079. Epub 2022 Jan 21.
Ko YK, Furuse Y, Ninomiya K, Otani K, Akaba H, Miyahara R, Imamura T, Imamura T, Cook AR, Saito M, Suzuki M, Oshitani H.
Secondary transmission of SARS-CoV-2 during the first two waves in Japan: Demographic characteristics and overdispersion
Int J Infect Dis. 2022 Mar;116:365-373. doi: 10.1016/j.ijid.2022.01.036. Epub 2022 Jan 20.
Ong J, Soh S, Ho SH, Seah A, Dickens BS, Tan KW, Koo JR, Cook AR, Richards DR, Gaw LY, Ng LC, Lim JT.
Fine-scale estimation of effective reproduction numbers for dengue surveillance
PLoS Comput Biol. 2022 Jan 20;18(1):e1009791. doi: 10.1371/journal.pcbi.1009791. eCollection 2022 Jan.
Magkos F, Lee MH, Lim M, Cook AR, Chhay V, Loh TP, Chia KS, Baig S, Ang IYH, Tay JYY, Khoo CM, Halter JB, Toh SA.
Dynamic assessment of insulin secretion and insulin resistance in Asians with prediabetes
Metabolism. 2022 Mar;128:154957. doi: 10.1016/j.metabol.2021.154957. Epub 2021 Dec 21.
Teo AKJ, Prem K, Wang Y, Pande T, Smelyanskaya M, Gerstel L, Chry M, Tuot S, Yi S.
Economic Evaluation of Community Tuberculosis Active Case-Finding Approaches in Cambodia: A Quasi-Experimental Study
Int J Environ Res Public Health. 2021 Dec 2;18(23):12690. doi: 10.3390/ijerph182312690.
Clapham HE, Chia WN, Tan LWL, Kumar V, Lim JM, Shankar N, Tun ZM, Zahari M, Hsu LY, Sun LJ, Wang LF, Tam CC.
Contrasting SARS-CoV-2 epidemics in Singapore: cohort studies in migrant workers and the general population
Int J Infect Dis. 2022 Feb;115:72-78. doi: 10.1016/j.ijid.2021.11.043. Epub 2021 Dec 2.
Le Bert N, Chia WN, Wan WY, Teo AKJ, Chong SZ, Tan N, Tan DSC, Chia A, Tan IB, Kunasegaran K, Chua QX, Abdad MY, Ng ASH, Vasoo S, Ang JX, Lee MS, Sun L, Fang J, Zhu F, Cook AR, Aw TC, Huang J, Tam C, Lee FS, Clapham H, Goh EJ, Peou MSS, Tan SP, Ong SK, Wang LF, Bertoletti A, Hsu LY, Ong BC.
Widely heterogeneous humoral and cellular immunity after mild SARS-CoV-2 infection in a homogeneous population of healthy young men
Emerg Microbes Infect. 2021 Dec;10(1):2141-2150. doi: 10.1080/22221751.2021.1999777.
Jafari Y, Yin M, Lim C, Pople D, Evans S, Stimson J, Pham TM; LSHTM CMMID COVID-19 working group; Read JM, Robotham JV, Cooper BS, Knight GM.
Effectiveness of infection prevention and control interventions, excluding personal protective equipment, to prevent nosocomial transmission of SARS-CoV-2: a systematic review and call for action
Infect Prev Pract. 2022 Mar;4(1):100192. doi: 10.1016/j.infpip.2021.100192. Epub 2021 Nov 29.
Singh SR, Teo AKJ, Prem K, Ong RT, Ashley EA, van Doorn HR, Limmathurotsakul D, Turner P, Hsu LY.
Epidemiology of Extended-Spectrum Beta-Lactamase and Carbapenemase-Producing Enterobacterales in the Greater Mekong Subregion: A Systematic-Review and Meta-Analysis of Risk Factors Associated With Extended-Spectrum Beta-Lactamase and Carbapenemase Isolation
Front Microbiol. 2021 Nov 26;12:695027. doi: 10.3389/fmicb.2021.695027. eCollection 2021.
Vinh DN, Nhat NTD, de Bruin E, Vy NHT, Thao TTN, Phuong HT, Anh PH, Todd S, Quan TM, Thanh NTL, Lien NTN, Ha NTH, Hong TTK, Thai PQ, Choisy M, Nguyen TD, Simmons CP, Thwaites GE, Clapham HE, Chau NVV, Koopmans M, Boni MF.
Age-seroprevalence curves for the multi-strain structure of influenza A virus
Nat Commun. 2021 Nov 18;12(1):6680. doi: 10.1038/s41467-021-26948-8.
Ng OT, Koh V, Chiew CJ, Marimuthu K, Thevasagayam NM, Mak TM, Chua JK, Ong SSH, Lim YK, Ferdous Z, Johari AKB, Chen MI, Maurer-Stroh S, Cui L, Lin RTP, Tan KB, Cook AR, Leo PY, Lee PVJ.
Impact of Delta Variant and Vaccination on SARS-CoV-2 Secondary Attack Rate Among Household Close Contacts
Lancet Reg Health West Pac. 2021 Dec;17:100299. doi: 10.1016/j.lanwpc.2021.100299. Epub 2021 Nov 1.
Soh S, Ho SH, Seah A, Ong J, Dickens BS, Tan KW, Koo JR, Cook AR, Tan KB, Sim S, Ng LC, Lim JT.
Economic impact of dengue in Singapore from 2010 to 2020 and the cost-effectiveness of Wolbachia interventions
PLOS Glob Public Health. 2021 Oct 13;1(10):e0000024. doi: 10.1371/journal.pgph.0000024. eCollection 2021.
Mo Y, Eyre DW, Lumley SF, Walker TM, Shaw RH, O'Donnell D, Butcher L, Jeffery K, Donnelly CA; Oxford COVID infection review team; Cooper BS.
Transmission of community- and hospital-acquired SARS-CoV-2 in hospital settings in the UK: A cohort study
PLoS Med. 2021 Oct 12;18(10):e1003816. doi: 10.1371/journal.pmed.1003816. eCollection 2021 Oct.
Haddad N, Clapham HE, Abou Naja H, Saleh M, Farah Z, Ghosn N, Mrad P, Howard N.
Calculating the serial interval of SARS-CoV-2 in Lebanon using 2020 contact-tracing data
BMC Infect Dis. 2021 Oct 11;21(1):1053. doi: 10.1186/s12879-021-06761-w.
Dickens BL, Koo JR, Lim JT, Park M, Sun H, Sun Y, Zeng Z, Quaye SED, Clapham HE, Wee HL, Cook AR.
Determining quarantine length and testing frequency for international border opening during the COVID-19 pandemic
J Travel Med. 2021 Oct 11;28(7):taab088. doi: 10.1093/jtm/taab088.
Sun H, Binder RA, Dickens B, de Sessions PF, Rabaa MA, Ho EXP, Cook AR, Carrillo FB, Monterrey JC, Kuan G, Balmaseda A, Ooi EE, Harris E, Sessions OM.
Viral genome-based Zika virus transmission dynamics in a paediatric cohort during the 2016 Nicaragua epidemic
EBioMedicine. 2021 Oct;72:103596. doi: 10.1016/j.ebiom.2021.103596. Epub 2021 Oct 7.
De Foo C, Grépin KA, Cook AR, Hsu LY, Bartos M, Singh S, Asgari N, Teo YY, Heymann DL, Legido-Quigley H.
Navigating from SARS-CoV-2 elimination to endemicity in Australia, Hong Kong, New Zealand, and Singapore
Lancet. 2021 Oct 30;398(10311):1547-1551. doi: 10.1016/S0140-6736(21)02186-3. Epub 2021 Oct 4.
Teo AKJ, Singh SR, Prem K, Hsu LY, Yi S.
Duration and determinants of delayed tuberculosis diagnosis and treatment in high-burden countries: a mixed-methods systematic review and meta-analysis
Respir Res. 2021 Sep 23;22(1):251. doi: 10.1186/s12931-021-01841-6.
Lim JT, Dickens BS, Tan KW, Koo JR, Seah A, Ho SH, Ong J, Rajarethinam J, Soh S, Cook AR, Ng LC.
Hyperendemicity associated with increased dengue burden
J R Soc Interface. 2021 Sep;18(182):20210565. doi: 10.1098/rsif.2021.0565. Epub 2021 Sep 15.
Chua BWB, Huynh VA, Lou J, Goh FT, Clapham H, Teerawattananon Y, Wee HL.
Protocol for the economic evaluation of COVID-19 pandemic response policies
BMJ Open. 2021 Sep 14;11(9):e051503. doi: 10.1136/bmjopen-2021-051503.
Tuot S, Teo AKJ, Prem K, Chhoun P, Pall C, Ung M, Ly PS, Jimba M, Yi S.
Community-based model for the delivery of antiretroviral therapy in Cambodia: a quasi-experimental study protocol
BMC Infect Dis. 2021 Aug 6;21(1):763. doi: 10.1186/s12879-021-06414-y.
Chao F, Gerland P, Cook AR, Guilmoto CZ, Alkema L.
Projecting sex imbalances at birth at global, regional and national levels from 2021 to 2100: scenario-based Bayesian probabilistic projections of the sex ratio at birth and missing female births based on 3.26 billion birth records
BMJ Glob Health. 2021 Aug;6(8):e005516. doi: 10.1136/bmjgh-2021-005516.
Pung R, Lin B, Maurer-Stroh S, Sirota FL, Mak TM, Octavia S, Pang J, Tan IB, Tan C, Ong BC, Cook AR; Singapore COVID-19 Outbreak Research Team; Lee VJ.
Factors influencing SARS-CoV-2 transmission and outbreak control measures in densely populated settings
Sci Rep. 2021 Jul 27;11(1):15297. doi: 10.1038/s41598-021-94463-3.
Prem K, Zandvoort KV, Klepac P, Eggo RM, Davies NG; Centre for the Mathematical Modelling of Infectious Diseases COVID-19 Working Group; Cook AR, Jit M.
Projecting contact matrices in 177 geographical regions: An update and comparison with empirical data for the COVID-19 era
PLoS Comput Biol. 2021 Jul 26;17(7):e1009098. doi: 10.1371/journal.pcbi.1009098. eCollection 2021 Jul.
Toor J, Echeverria-Londono S, Li X, Abbas K, Carter ED, Clapham HE, Clark A, de Villiers MJ, Eilertson K, Ferrari M, Gamkrelidze I, Hallett TB, Hinsley WR, Hogan D, Huber JH, Jackson ML, Jean K, Jit M, Karachaliou A, Klepac P, Kraay A, Lessler J, Li X, Lopman BA, Mengistu T, Metcalf CJE, Moore SM, Nayagam S, Papadopoulos T, Perkins TA, Portnoy A, Razavi H, Razavi-Shearer D, Resch S, Sanderson C, Sweet S, Tam Y, Tanvir H, Tran Minh Q, Trotter CL, Truelove SA, Vynnycky E, Walker N, Winter A, Woodruff K, Ferguson NM, Gaythorpe KA.
Lives saved with vaccination for 10 pathogens across 112 countries in a pre-COVID-19 world
Elife. 2021 Jul 13;10:e67635. doi: 10.7554/eLife.67635.
Sharp TM, Anderson KB, Katzelnick LC, Clapham H, Johansson MA, Morrison AC, Harris E, Paz-Bailey G, Waterman SH.
Knowledge gaps in the epidemiology of severe dengue impede vaccine evaluation
Lancet Infect Dis. 2022 Feb;22(2):e42-e51. doi: 10.1016/S1473-3099(20)30871-9. Epub 2021 Jul 12.
Painter C, Isaranuwatchai W, Prawjaeng J, Wee HL, Chua BWB, Huynh VA, Lou J, Goh FT, Luangasanatip N, Pan-Ngum W, Yi W, Clapham H, Teerawattananon Y.
Avoiding Trouble Ahead: Lessons Learned and Suggestions for Economic Evaluations of COVID-19 Vaccines
Appl Health Econ Health Policy. 2021 Jul;19(4):463-472. doi: 10.1007/s40258-021-00661-5. Epub 2021 Jul 8.
Millar R, Morton A, Bufali MV, Engels S, Dabak SV, Isaranuwatchai W, Chalkidou K, Teerawattananon Y.
Assessing the performance of health technology assessment (HTA) agencies: developing a multi-country, multi-stakeholder, and multi-dimensional framework to explore mechanisms of impact
Cost Eff Resour Alloc. 2021 Jul 2;19(1):37. doi: 10.1186/s12962-021-00290-8.
Petrunoff NA, Yi NX, Dickens B, Sia A, Koo J, Cook AR, Lin WH, Ying L, Hsing AW, van Dam RM, Müller-Riemenschneider F.
Associations of park access, park use and physical activity in parks with wellbeing in an Asian urban environment: a cross-sectional study
Int J Behav Nutr Phys Act. 2021 Jul 2;18(1):87. doi: 10.1186/s12966-021-01147-2.
Park M, Lim JT, Wang L, Cook AR, Dickens BL.
Urban-Rural Disparities for COVID-19: Evidence from 10 Countries and Areas in the Western Pacific
Health Data Sci. 2021 Jun 18;2021:9790275. doi: 10.34133/2021/9790275. eCollection 2021.
Tan RKJ, Low TQY, Le D, Tan A, Tyler A, Tan C, Kwok C, Banerjee S, Cook AR, Wong ML.
Experienced Homophobia and Suicide Among Young Gay, Bisexual, Transgender, and Queer Men in Singapore: Exploring the Mediating Role of Depression Severity, Self-Esteem, and Outness in the Pink Carpet Y Cohort Study
LGBT Health. 2021 Jul;8(5):349-358. doi: 10.1089/lgbt.2020.0323. Epub 2021 Jun 17.
Scroll to Top